COVID-19: The T Cell Story

berthub.eu:

When COVID-19 burst on to the scene, tests quickly showed that the everyone was susceptible – no pre-existing antibodies were found that bound to the SARS-CoV-2 virus. This led to dire predictions that over 80% of the population might eventually fall ill.

Now more than six months in, this has not happened, and it does not appear to be close to happening. A few months ago, noted virologist Christian Drosten mused in his (German) podcast that some people might have a level of immunity after all, but he wasn’t yet sure. Turns out he may have been right.

In this post, I hope to cast some light on:

  • The slightly mysterious slowing down of the COVID-19 epidemic

  • The several layers of our immune system

  • Cell Mediated Immunity / T cells

  • How around 50% of us appear to have (some?) Cell Mediated Immunity against COVID-19

  • What this might mean (spoiler: not sure)

Trinity study confirms accuracy concerns on contact tracing apps

Trinity College Dublin:

A new measurement study released by Prof. Doug Leith and Dr Stephen Farrell, researchers at the CONNECT Centre in the School of Computer Science and Statistics at Trinity College Dublin, confirms that it is likely to be challenging to use Bluetooth to reliably detect when people using contact tracing apps are within 2m of one another.

The researchers took measurements in several locations in Dublin, in a supermarket, on board a train carriage, sitting around a meeting table, and walking outdoors on a city street and found problems with accurately measuring social distancing using Bluetooth wireless.

Political groups use “deeply spooky” protester location data, report finds

Kate Cox:

Surveillance is widespread at protests. Both local and federal authorities have broad authority to undertake both covert and overt intelligence-gathering and surveillance of demonstrations.

Law enforcement uses location data for other kinds of investigations as well. Cops need to get a warrant to track a specific individual’s mobile phone. Doing it the other way around, though—picking a location, and then looking at who was there—has fewer restrictions.

Late last year, for example, federal investigators trying to solve an arson case in Wisconsin gathered location-history data from 1,500 devices that passed through the area over a nine-hour window. A similar reverse location warrant used in Florida led police mistakenly to identify a man who happened to be riding his bike near the scene of a burglary as the top suspect.

Other private entities also use geofencing tools to zero in on individuals. Ambulance-chaser law firms, for example, have advertised to people who have visited hospital emergency rooms.

While phone owners may understand that their devices collect location data for certain uses, consumers often have no idea how broadly sold and traded that information then is. That’s according to Keith Chen, a behavioral economics professor at University of California, Los Angeles, who spoke to the WSJ. “To the degree that this becomes very common, I do worry that it starts to put a chill on people’s willingness to peaceably assemble,” Chen told the Journal.

America in the Aftermath of George Floyd: Between Paganism and Christianity

Joshua Mitchell:

Most of human history is pagan. The advent of Christianity is a relatively recent affair. Some say Christianity is now receding. Some say Christianity has not yet fully taken hold. Is secularism taking hold? Is paganism reemerging? Do we live in a strange time characterized by a return to paganism, though with Christian characteristics? Whichever account is correct has implications for America in the aftermath of George Floyd’s death.

The pagan world was the world of many gods, each associated with a people who made payments and sacrifices to their gods. Rousseau wrote in The Social Contract that when pagan nations battled other pagan nations, soldiers did not battle soldiers; rather, gods battled gods. Hence, the cathartic rage of pagan wars.

Christianity toppled the pagan world. The cathartic rage of war, Christians argued, in which one nation purged another, could not solve the problem of man’s stain, which was original, a term we no longer really understand. Original sin means that sin is always already there, prior to a person being born into membership of this nation or that nation. What this means is that blood rage cannot expiate stain; the sins of my people can no longer be purged by cathartic rage toward your people, and vice versa. That is why Rousseau concluded that Christianity had ruined politics, and had produced a civilization of pacifists, whose rage toward other nations could not be enkindled for the purpose of war. If you doubt this, ponder the fact that Christianity developed a “doctrine of just war,” according to which cathartic rage could not be reason enough to go to war.

Against the backdrop of pagan history, Christianity is revolutionary, not evolutionary. The evolution of paganism, had it occurred, would have brought about novel forms of cathartic rage toward other peoples. Christianity declared that no matter what evolutionary “advance” paganism might bring, it could never adequately address the problem of man’s stain. Christianity was revolutionary because it declared that we must look elsewhere than toward others, with cathartic rage, to expiate our stains. That “elsewhere” is divine, not mortal. Only through Christ, the divine scapegoat, who “takes upon himself the sins of the world” (John 1:29), can man be cleansed.

Judy

When thinking of Judy, I am reminded of James 2 – 6 :

2 Consider it pure joy, my brothers and sisters,[a] whenever you face trials of many kinds, 3 because you know that the testing of your faith produces perseverance. 4 Let perseverance finish its work so that you may be mature and complete, not lacking anything. 5 If any of you lacks wisdom, you should ask God, who gives generously to all without finding fault, and it will be given to you. 6 But when you ask, you must believe and not doubt, because the one who doubts is like a wave of the sea, blown and tossed by the wind.

I can think of no one who has endured so many personal trials, yet always – always lead with smiles, hugs and love for everyone.

What an example: love God and love your neighbor.

Rest in Peace.

Salvation is found in no one else, for there is no other name under heaven given to mankind by which we must be saved” (Acts 4:12).

My Open Records Request Response on Closing Wisconsin State Parks

15 May 2020 Response from Governor Evers’ Office of Legal Counsel:

Via Electronic Mail Only

Dear Mr. Zellmer:

Please find attached records [5.2MB] in response to your request made on April 9, 2020. To fulfil your request, we searched all staff emails for the terms “park”, “parks”, “state park”, and “state parks” between the dates of March 23, 2020 and April 9, 2020. The responsive records are attached with this letter.

You will see that the records include some redactions. Under the common law balancing test, we made efforts to redact cell and office phone numbers of state employees. Making this information available would cause unnecessary and unwarranted interruptions to employees both at work and at home, affecting their ability to work efficiently. There is minimal harm to the public interest given that these same employees are available through publicly available means, such as publicly listed numbers.
We also redacted the phone numbers of members of the public that contacted the Governor’s office. Making this information available could subject the individuals to harassing contact and would constitute an invasion of their privacy. The public’s interest in individual privacy outweighs any minimal harm, especially given that no other identifying information has been withheld. The strong public interest in knowing who is emailing elected officials is not affected by withholding those individuals’ phone numbers.

We also redacted the non-public official direct email address of the Governor. Making this email addresses available would significantly hinder the Governor’s ability to communicate and work efficiently. There is minimal harm to the public interest, given that there are numerous public means to communicate with the Office of the Governor.

Pursuant to Wis. Stat. § 19.35(4)(b), these determinations are subject to review by mandamus under Wis. Stat. § 19.37(1) or upon application to a district attorney or the Attorney General.

Sincerely,

Office of Legal Counsel

Posted in Uncategorized.

German Official Leaks Report Denouncing Corona as ‘A Global False Alarm’

Strategic-Culture:

Germany’s federal government and mainstream media are engaged in damage control after a report that challenges the established Corona narrative leaked from the interior ministry.

Some of the report key passages are:

  • The dangerousness of Covid-19 was overestimated: probably at no point did the danger posed by the new virus go beyond the normal level.

  • The people who die from Corona are essentially those who would statistically die this year, because they have reached the end of their lives and their weakened bodies can no longer cope with any random everyday stress (including the approximately 150 viruses currently in circulation).

  • Worldwide, within a quarter of a year, there has been no more than 250,000 deaths from Covid-19, compared to 1.5 million deaths [25,100 in Germany] during the influenza wave 2017/18.

  • The danger is obviously no greater than that of many other viruses. There is no evidence that this was more than a false alarm.

  • A reproach could go along these lines: During the Corona crisis the State has proved itself as one of the biggest producers of Fake News.

So far, so bad. But it gets worse.

The report focuses on the “manifold and heavy consequences of the Corona measures” and warns that these are “grave”.

More people are dying because of state-imposed Corona-measures than they are being killed by the virus.

The reason is a scandal in the making:

A Corona-focused German healthcare system is postponing life-saving surgery and delaying or reducing treatment for non-Corona patients.

The Amish Health Care System

Slate Star:

How does this compare to the US as a whole? The National Center For Health Statistics says that the average American spends $11,000 on health care. This suggests that the average American spends between five and ten times more on health care than the average Amish person.

How do the Amish keep costs so low? R&D (plus a few other sources) identify some key strategies.

First, the Amish community bargains collectively with providers to keep prices low. This isn’t unusual – your insurance company does the same – but it nets them better prices than you would get if you tried to pay out of pocket at your local hospital. This article gives some examples of Amish getting sticker prices discounted from between 50% to 66% with this tactic alone; Medicare gets about the same.

Second, the Amish are honorable customers. This separates them from insurance companies, who are constantly trying to scam providers however they can. Much of the increase in health care costs is “administrative expenses”, and much of these administrative expenses is hiring an army of lawyers, clerks, and billing professionals to thwart insurance companies’ attempts to cheat their way out of paying. If you are an honorable Amish person and the hospital knows you will pay your bill on time with zero fuss, they can waive all this. 

But can this really be the reason Amish healthcare is cheaper? When insurance companies negotiate with providers, patients are on the side of the insurances; when insurance companies get good deals (eg a deal of zero dollars because the insurance has scammed the hospital), the patient’s care is cheaper, and the insurance company can pass some of those savings down as lower prices. If occasionally scamming providers meant insurance companies had to pay more money total, then they would stop doing it. My impression is that the real losers here are uninsured patients; absent any pressure to do otherwise, hospitals will charge them the sticker price, which includes the dealing-with-insurance-scams fee. The Amish successfully pressure them to waive that fee, which gets them better prices than the average uninsured patient, but still doesn’t land them ahead of insured people.

Third, Amish don’t go to the doctor for little things. They either use folk medicine or chiropractors. Some of the folk medicine probably works. The chiropractors probably don’t, but they play a helpful role reassuring people and giving them the appropriate obvious advice while telling the really serious cases to seek outside care. With this help, Amish people mostly avoid primary care doctors. Holmes County health statistics find that only 16% of Amish have seen a doctor in the past year, compared to 54% of English.

An open letter to software engineers criticizing Neil Ferguson’s epidemics simulation code

Konrad Hinsen:

But the main message of this letter is something different: it’s about your role in this story. That’s of course a collective you, not you the individual reading this letter. It’s you, the software engineering community, that is responsible for tools like C++ that look as if they were designed for shooting yourself in the foot. It’s also you, the software engineering community, that has made no effort to warn the non-expert public of the dangers of these tools. Sure, you have been discussing these dangers internally, even a lot. But to outsiders, such as computational scientists looking for implementation tools for their models, these discussions are hard to find and hard to understand. There are lots of tutorials teaching C++ to novices, but I have yet to see a single one that starts with a clear warning about the dangers. You know, the kind of warning that every instruction manual for a microwave oven starts with: don’t use this to dry your dog after a bath. A clear message saying “Unless you are willing to train for many years to become a software engineer yourself, this tool is not for you.”

As a famous member of your community famously said, software is eating the world. That gives you, dear software engineers, a lot of power in modern society. But power comes with responsibility. If you want scientists to construct reliable implementations of models that matter for public health decisions, the best you can do is make good tools for that task, but the very least you must do is put clear warning signs on tools that you do not want scientists to use – always keeping in mind that scientists are not software engineers, and have neither the time nor the motivation to become software engineers.